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Registro Completo |
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Biblioteca(s): |
Embrapa Florestas. |
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Data corrente: |
20/06/2016 |
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Data da última atualização: |
21/06/2016 |
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Tipo da produção científica: |
Artigo em Periódico Indexado |
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Autoria: |
VIANA, A. P.; RESENDE, M. D. V. de; RIAZ, S.; WALKER, M. A. |
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Afiliação: |
Alexandre Pio Viana, Universidade Estadual do Norte Fluminense; MARCOS DEON VILELA DE RESENDE, CNPF; Summaira Riaz, Universidade da Califórnia; Michael Andrew Walker, Universidade da Califórinia. |
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Título: |
Genome selection in fruit breeding: application to table grapes. |
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Ano de publicação: |
2016 |
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Fonte/Imprenta: |
Scientia Agricola, Piracicaba, v. 73, n. 2, p. 142-149, Mar./Apr. 2016. |
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DOI: |
http://dx.doi.org/10.1590/0103-9016-2014-0323 |
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Idioma: |
Inglês |
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Conteúdo: |
Genomic selection (GS) has recently been proposed as a new selection strategy which represents an innovative paradigm in crop improvement, now widely adopted in animal breeding. Genomic selection relies on phenotyping and high-density genotyping of a sufficiently large and representative sample of the target breeding population, so that the majority of loci that regulate a quantitative trait are in linkage disequilibrium with one or more molecular markers and can thus be captured by selection. In this study we address genomic selection in a practical fruit breeding context applying it to a breeding population of table grape obtained from a cross between the hybrid genotype D8909-15 (Vitis rupestris × Vitis arizonica/girdiana), which is resistant to dagger nematode and Pierce?s disease (PD), and ?B90-116?, a susceptible Vitis vinifera cultivar with desirable fruit characteristics. Our aim was to enhance the knowledge on the genomic variation of agronomical traits in table grape populations for future use in marker-assisted selection (MAS) and GS, by discovering a set of molecular markers associated with genomic regions involved in this variation. A number of Quantitative Trait Loci (QTL) were discovered but this method is inaccurate and the genetic architecture of the studied population was better captured by the BLasso method of genomic selection, which allowed for efficient inference about the genetic contribution of the various marker loci. The technology of genomic selection afforded greater efficiency than QTL analysis and can be very useful in speeding up the selection procedures for agronomic traits in table grapes. MenosGenomic selection (GS) has recently been proposed as a new selection strategy which represents an innovative paradigm in crop improvement, now widely adopted in animal breeding. Genomic selection relies on phenotyping and high-density genotyping of a sufficiently large and representative sample of the target breeding population, so that the majority of loci that regulate a quantitative trait are in linkage disequilibrium with one or more molecular markers and can thus be captured by selection. In this study we address genomic selection in a practical fruit breeding context applying it to a breeding population of table grape obtained from a cross between the hybrid genotype D8909-15 (Vitis rupestris × Vitis arizonica/girdiana), which is resistant to dagger nematode and Pierce?s disease (PD), and ?B90-116?, a susceptible Vitis vinifera cultivar with desirable fruit characteristics. Our aim was to enhance the knowledge on the genomic variation of agronomical traits in table grape populations for future use in marker-assisted selection (MAS) and GS, by discovering a set of molecular markers associated with genomic regions involved in this variation. A number of Quantitative Trait Loci (QTL) were discovered but this method is inaccurate and the genetic architecture of the studied population was better captured by the BLasso method of genomic selection, which allowed for efficient inference about the genetic contribution of the various marker loci. The technology of genomic select... Mostrar Tudo |
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Palavras-Chave: |
Genomic selection; Marker assisted selection; MAS; Melhoramento genético; SSR markers; Uva de mesa. |
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Thesagro: |
Fruta; Marcador molecular; Melhoramento vegetal; Uva. |
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Thesaurus Nal: |
Fruits; linkage disequilibrium; Plant breeding; Table grapes. |
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Categoria do assunto: |
G Melhoramento Genético |
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URL: |
https://ainfo.cnptia.embrapa.br/digital/bitstream/item/144571/1/2016-M.Deon-SA-GenomeSelection.pdf
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Marc: |
LEADER 02617naa a2200337 a 4500
001 2047486
005 2016-06-21
008 2016 bl uuuu u00u1 u #d
024 7 $ahttp://dx.doi.org/10.1590/0103-9016-2014-0323$2DOI
100 1 $aVIANA, A. P.
245 $aGenome selection in fruit breeding$bapplication to table grapes.$h[electronic resource]
260 $c2016
520 $aGenomic selection (GS) has recently been proposed as a new selection strategy which represents an innovative paradigm in crop improvement, now widely adopted in animal breeding. Genomic selection relies on phenotyping and high-density genotyping of a sufficiently large and representative sample of the target breeding population, so that the majority of loci that regulate a quantitative trait are in linkage disequilibrium with one or more molecular markers and can thus be captured by selection. In this study we address genomic selection in a practical fruit breeding context applying it to a breeding population of table grape obtained from a cross between the hybrid genotype D8909-15 (Vitis rupestris × Vitis arizonica/girdiana), which is resistant to dagger nematode and Pierce?s disease (PD), and ?B90-116?, a susceptible Vitis vinifera cultivar with desirable fruit characteristics. Our aim was to enhance the knowledge on the genomic variation of agronomical traits in table grape populations for future use in marker-assisted selection (MAS) and GS, by discovering a set of molecular markers associated with genomic regions involved in this variation. A number of Quantitative Trait Loci (QTL) were discovered but this method is inaccurate and the genetic architecture of the studied population was better captured by the BLasso method of genomic selection, which allowed for efficient inference about the genetic contribution of the various marker loci. The technology of genomic selection afforded greater efficiency than QTL analysis and can be very useful in speeding up the selection procedures for agronomic traits in table grapes.
650 $aFruits
650 $alinkage disequilibrium
650 $aPlant breeding
650 $aTable grapes
650 $aFruta
650 $aMarcador molecular
650 $aMelhoramento vegetal
650 $aUva
653 $aGenomic selection
653 $aMarker assisted selection
653 $aMAS
653 $aMelhoramento genético
653 $aSSR markers
653 $aUva de mesa
700 1 $aRESENDE, M. D. V. de
700 1 $aRIAZ, S.
700 1 $aWALKER, M. A.
773 $tScientia Agricola, Piracicaba$gv. 73, n. 2, p. 142-149, Mar./Apr. 2016.
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Esconder MarcMostrar Marc Completo |
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Registro original: |
Embrapa Florestas (CNPF) |
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| Registros recuperados : 20 | |
| 2. |  | ARRUDA, R. L.; GARCIA, M. L.; SOUSA, T. P. DE; FILIPPI, M. C. C. de; CORTES, M. V. de C. B.; CONCEIÇÃO, E. C. da. Avaliação da atividade antifúngica do extrato de Ruta graveolens L. na inibição do crescimento micelial de Magnaporthe oryzae. In: SEMINÁRIO JOVENS TALENTOS, 9., 2015, Santo Antônio de Goiás. Coletânea dos resumos apresentados. Santo Antônio de Goiás: Embrapa Arroz e Feijão, 2015. p. 98. (Embrapa Arroz e Feijão. Documentos, 309).| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 3. | | ARRUDA, R. L.; PAZ, A. T. S.; BARA, M. T. F.; CÔRTES, M. V. de C. B.; FILIPPI, M. C. C. de; CONCEIÇÃO, E. C. da. An approach on phytoalexins: function, characterization and biosynthesis in plants of the family Poaceae. Ciência Rural, Santa Maria, v. 46, n. 7, p. 1206-1216, jul. 2016.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 4. | | ARRUDA, R. L.; RODRIGUES, M. C. de M.; CORTES, M. V. de C. B.; FILIPPI, M. C. C. de; MASCARIN, G. M.; CONCEIÇÃO, E. C. da. Plant extract of Ruta graveolens standardized in furanocoumarins: resistance elicitorin rice plants against Magnaporthe oryzae. International Journal of Research Studies in Biosciences, v. 5, n. 8, p. 11-21, Aug. 2017.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 5 |
| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 5. | | ARRUDA, R. L.; SOUSA, T. P. de; FILIPPI, M. C. C. de; CORTES, M. V. de C. B.; CONCEIÇÃO, E. C. da. Utilização de extrato vegetal de Ruta graveolens L. no controle de Magnaporthe oryzae. In: SEMINÁRIO JOVENS TALENTOS, 10., 2016, Santo Antônio de Goiás. Coletânea dos resumos apresentados. Santo Antônio de Goiás: Embrapa Arroz e Feijão, 2016. p. 74. (Embrapa Arroz e Feijão. Documentos, 311).| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 7. | | FARIA, A. M.; SANTOS, A. da S.; FERREIRA, L. L.; BASTOS, T. S. A.; LOULY, C. C. B.; MATOS, M. P. C.; CONCEIÇÃO, E. C. da; MOURA, V. M. B. D. de. Acaricidal activity of ethanolic extracts of Stryphnodendron adstringens and Lafoensia pacari and oil resins from Copaifera sp. and Pterodon emarginatus against Sarcoptes scabiei var. suis. Pesquisa Veterinária Brasileira, Rio de Janeiro, v. 37, n. 12, p. 1411-1415, dezembro 2017. Título em português: Atividade acaricida dos extratos etanólicos de Stryphnodendron adstringens Mart. e Lafoensia pacari A. St Hil., bem como das óleo-resinas de Copaifera sp. e Pterodon emarginatus Vogel, 1837 contra Sarcoptes scabiei...| Biblioteca(s): Embrapa Unidades Centrais. |
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| 10. | | OLIVEIRA, A. E. M. F. M.; BEZERRA, D. C.; DUARTE, J. L.; CRUZ, R. A. S.; SOUTO, R. N. P.; FERREIRA, R. M. A.; NOGUEIRA, J.; CONCEIÇÃO, E. C. da; LEITÃO, S.; BIZZO, H. R.; GAMA, P. E.; CARVALHO, J. C. T.; FERNANDES, C. P. Essential oil from Pterodon emarginatus as a promising natural raw material for larvicidal nanoemulsions against a tropical disease vector. Sustainable Chemistry and Pharmacy, v. 6, p. 1-9, 2017.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 5 |
| Biblioteca(s): Embrapa Agroindústria de Alimentos. |
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| 11. | | OLIVEIRA, M. I. de S.; ARRIEL, M. T.; CORTES, M. V. de C. B.; FILIPPI, M. C. C. de; SILVA-LOBO, V. L.; CONCEIÇÃO, E. C. da. Determinação da relação ótima entre carbono e nitrogênio para o cultivo da linhagem Pseudomonas fluorescens (BRM 32111). In: SEMINÁRIO JOVENS TALENTOS, 11., 2017, Santo Antônio de Goiás. Coletânea dos resumos apresentados. Santo Antônio de Goiás: Embrapa Arroz e Feijão, 2017. p. 96. (Embrapa Arroz e Feijão. Documentos, 316).| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 13. | | OLIVEIRA, M. I. de S.; CHAIBUB, A. A.; SOUSA, T. P.; CORTES, M. V. de C. B.; SOUZA, A. C. A. de; CONCEIÇÃO, E. C. da; FILIPPI, M. C. C. de. Formulações contendo Pseudomonas fluorescens e Burkholderia pyrrocinia para o manejo integrado da brusone do arroz de terras altas. In: SEMINÁRIO JOVENS TALENTOS, 13., 2019, Santo Antônio de Goiás. Resumos... Santo Antônio de Goiás: Embrapa Arroz e Feijão, 2019. p. 96.| Tipo: Resumo em Anais de Congresso |
| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 14. | | OLIVEIRA, M. I. de S.; CHAIBUB, A. A.; SOUSA, T. P.; CÔRTES, M. V. de C. B.; SOUZA, A. C. A. de; CONCEIÇÃO, E. C. da; FILIPPI, M. C. C. de. Formulations of Pseudomonas fluorescens and Burkholderia pyrrocinia control rice blast of upland rice cultivated under no-tillage system. Biological Control, v. 144, 104153, 2020.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: A - 2 |
| Biblioteca(s): Embrapa Arroz e Feijão. |
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| 17. | | REIS, K. B.; CORTÊS, M. V. de C. B.; MARTINS, F. S.; FILIPPI, M. C. C. de; PAULA, J. R. de; CONCEIÇÃO, E. C. da. Characterization of rue extract and its potential for controlling rice blast. Pesquisa Agropecuária Brasileira, v. 50, n. 12, p. 1121-1130, dez. 2015.| Tipo: Artigo em Periódico Indexado | Circulação/Nível: B - 1 |
| Biblioteca(s): Embrapa Arroz e Feijão; Embrapa Unidades Centrais. |
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| Registros recuperados : 20 | |
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| Nenhum registro encontrado para a expressão de busca informada. |
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